2025

Journal articles

Oleksii Bratash, Rémi Courson, Laurent Malaquin, Thierry Leichle, Arnaud Buhot, et al.. Multiplexed Bio‐detection on an Interferometric Optical Waveguide Assembly. Advanced Materials Interfaces, 2025, ⟨10.1002/admi.202400941⟩. ⟨hal-04929729⟩

Ophélie Thomas- -Chemin, Sébastien Janel, Zeyd Boumehdi, Childérick Séverac, Emmanuelle Trevisiol, et al.. Advancing High-Throughput Cellular Atomic Force Microscopy with Automation and Artificial Intelligence. ACS Nano, 2025, 19 (5), pp.5045-5062. ⟨10.1021/acsnano.4c07729⟩. ⟨hal-04956507⟩

Mohammad-H. Baz, Marion Valette, Mireille André, Audrey Varin, Emmanuelle Trevisiol, et al.. Isolation of adipose stromal cells from blood using a two-step microfluidic platform ASCfinder. Scientific Reports, 2025, 15 (1), pp.10471. ⟨10.1038/s41598-025-94353-y⟩. ⟨hal-05007797⟩

Victor Fabre, Franck Carcenac, Adrian Laborde, Jean Baptiste Doucet, Christophe Vieu, et al.. A new methodology for sub‐femtomolar detection of organic molecules through the combination of surface‐enhanced Raman spectroscopy and a superhydrophobic fluidic concentrator. Analytical Science Advances, 2025, 6 (1), pp.e202400013. ⟨10.1002/ansa.202400013⟩. ⟨hal-05036843⟩

2024

Journal articles

Ophélie Thomas- -Chemin, Childérick Séverac, Abderazzak Moumen, Adrian Martinez Rivas, Christophe Vieu, et al.. Automated bio-AFM generation of large mechanome data set and their analysis by machine learning to classify cancerous cell lines. ACS Applied Materials & Interfaces, 2024, 16 (34), pp.44504-44517. ⟨10.1021/acsami.4c09218⟩. ⟨hal-04674006⟩

L. Giraud, Olivier Marsan, E. Dague, M. Ben-Neji, Céline Cougoule, et al.. Surface-anchored carbon nanomaterials for antimicrobial surfaces. Nanoscale, 2024, 35 (16), pp.16517-16534. ⟨10.1039/d4nr02810d⟩. ⟨hal-04685264⟩

Christos I. Papadopoulos, Larue Anne Edith, Clara Toulouze, Omar Mokhtari, Julien Lefort, et al.. A versatile micromodel technology to explore biofilm development in porous media flows. Lab on a Chip, 2024, 24 (2), pp.254-271. ⟨10.1039/D3LC00293D⟩. ⟨hal-04798978⟩

Ibrahima Dramé, Yannick Rossez, Frederic Krzewinski, Nicolas Charbonnel, Laurence Ollivier-Nakusi, et al.. FabR, a regulator of membrane lipid homeostasis, is involved in Klebsiella pneumoniae biofilm robustness. mBio, In press, 0, ⟨10.1128/mbio.01317-24⟩. ⟨hal-04698805⟩

Laria Rodríguez-Quesada, Karla Ramírez-Sánchez, Cécile Formosa-Dague, Etienne Dague, Giovanni Sáenz-Arce, et al.. Evaluation of Conductive Porous Biobased Composites with Tunable Mechanical Properties for Potential Biological Applications. ACS Omega, 2024, 9 (43), pp.43426-43437. ⟨10.1021/acsomega.4c04391⟩. ⟨hal-04750246⟩

Charlotte da Silva, Camille Lamarche, Carole Pichereaux, Emmanuelle Mouton-Barbosa, Gauthier Demol, et al.. Bacterial eradication by a low-energy pulsed electron beam generator. Bioelectrochemistry, 2024, 156, pp.108593. ⟨10.1016/j.bioelechem.2023.108593⟩. ⟨hal-04735507⟩

Gorkem Bakir, Tanya E S Dahms, Hélène Martin-Yken, Hans A Bechtel, Kathleen M Gough. Saccharomyces cerevisiae CellWall Remodeling in the Absence of Knr4 and Kre6 Revealed by Nano-FourierTransform Infrared Spectroscopy. Applied Spectroscopy, 2024, 78 (4), pp.355-364. ⟨10.1177/00037028231213658⟩. ⟨hal-04472218⟩

Elise Rigot, Lorenzo Bramanti. Les forêts animales marines, une rencontre fertile. Arts et sciences, 2024, 8 : Arts et Sciences (Numéro spécial OOB), pp.80-91. ⟨10.21494/ISTE.OP.2024.1116⟩. ⟨hal-04503543⟩

Matthieu Sagot, Timothée Derkenne, Perrine Giunchi, Yohan Davit, Jean-Philippe Nougayrède, et al.. Functionality integration in stereolithography 3D printed microfluidics using a “print-pause-print” strategy. Lab on a Chip, 2024, 24 (14), pp.3508-3520. ⟨10.1039/D4LC00147H⟩. ⟨hal-04632660⟩

Book sections

Elise Rigot, Christophe Vieu. Corallum fabrica : une archive vivante comme média d’encapacitation pour la recherche scientifique. CNRS. Design et communication - Créations collectives, CNRS Editions, 2024, Les Essentiels d'Hermès, 978-2-271-14964-0. ⟨hal-04469439⟩

Conference papers

Claire Lac, Pauline Thomas, Julie Foncy, Marjorie Fanjul, Laurent Malaquin, et al.. Tumoral mechanical stress reprograms adjacent tissue micro-environment to fuel pancreatic tumor progression: identification of a new subtype of activated fibroblasts.. Journée de l'Association Française pour la Recherche sur le Cancer du Pancréas., Sep 2024, Toulouse, France. ⟨hal-04834786⟩

Other documents

Ophélie Thomas- -Chemin, Childérick Séverac, Yara Abidine, Emmanuelle Trévisiol, Etienne Dague. Machine learning (ML) classification of cells on the basis of their viscoelastic properties. European Microscopy Congress (EMC 2024), Aug 2024, Copenhague, Denmark. , 2024. ⟨hal-04673995⟩

M Sagot, D Rojas, David Bourrier, A Arcas, A Ferrand, et al.. Clip-Chips: 3D printed microfluidic and characterization modules for cell culture applications. NanoBioTech 2024, Nov 2024, Montreux (Switzerland), Switzerland. 2024. ⟨hal-04885986⟩

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. Dialogue between pancreatic tumor and adjacent tissue: a relationship under pressure. Micro-physiological models: From organoids to organs-on-chip, Sep 2024, Cargèse, France. 2024. ⟨hal-04834165⟩

Elise Rigot. Le Vampyroteuthis infernalis comme un phare bioluminescent pour penser parmi les vivants. Quelques mutations : De 1981 à 1991. 2024. ⟨hal-04512920⟩

Preprints, Working Papers, ...

Victoria Passucci, Ophélie Thomas--Chemin, Omar Dib, Antony Ali Assaf, Marie-José Durand, et al.. Investigating the role of extracellular polymeric substances produced by Parachlorella kessleri in Zn(II) bioremediation using atomic force microscopy. 2024. ⟨hal-04745729⟩

2023

Journal articles

Maja Levak Zorinc, Irem Demir-Yilmaz, Cécile Formosa-Dague, Ivna Vrana, Blaženka Gašparović, et al.. Reconstructed membrane vesicles from the microalga Dunaliella as a potential drug delivery system. Bioelectrochemistry, 2023, 150, pp.108360. ⟨10.1016/j.bioelechem.2022.108360⟩. ⟨hal-04011755⟩

Irem Demir-Yilmaz, Marion Schiavone, Jérôme Esvan, Pascal Guiraud, Cécile Formosa-Dague. Combining AFM, XPS and chemical hydrolysis to understand the complexity and dynamics of C. vulgaris cell wall composition and architecture. Algal Research - Biomass, Biofuels and Bioproducts, 2023, 72, pp.103102. ⟨10.1016/j.algal.2023.103102⟩. ⟨hal-04285172v2⟩

Irem Demir-Yilmaz, Malak Souad Ftouhi, Stéphane Balayssac, Pascal Guiraud, Christophe Coudret, et al.. Bubble functionalization in flotation process improve microalgae harvesting. Chemical Engineering Journal, 2023, 452 (part 2), ⟨10.1016/j.cej.2022.139349⟩. ⟨hal-03788878⟩

Rémi Courson, Oleksii Bratash, Ali Maziz, Cloé Desmet, Ricardo Alvarado Meza, et al.. Rapid prototyping of a polymer MEMS droplet dispenser by laser-assisted 3D printing. Microsystems & Nanoengineering, 2023, 9 (1), pp.85. ⟨10.1038/s41378-023-00559-3⟩. ⟨hal-04729110⟩

Abigail Burato Rosales, Nadège Durban-Benizio, Xuan Loc Nguyen, Vincent Bouvier, Clémentine Lamo, et al.. Minimizing bacterial adhesion on membrane: Multiscale characterization of surface modifications. Journal of Membrane Science, 2023, 684, pp.121867. ⟨10.1016/j.memsci.2023.121867⟩. ⟨hal-04137642⟩

Zacchari Ben Meriem, Tiphaine Mateo, Julien Faccini, Céline Denais, Romane Dusfour-Castan, et al.. A microfluidic mechano-chemostat for tissues and organisms reveals that confined growth is accompanied with increased macromolecular crowding. Lab on a Chip, 2023, 20, pp.4445-4455. ⟨10.1039/d3lc00313b⟩. ⟨hal-04214597⟩

Mélanie Escudero, Laurence Vaysse, Gozde Eke, Marion Peyrou, Francesc Villarroya, et al.. Scalable Generation of Pre‐Vascularized and Functional Human Beige Adipose Organoids. Advanced Science, 2023, 10 (31), pp.e2301499. ⟨10.1002/advs.202301499⟩. ⟨hal-04266619v2⟩

Rémi Courson, Oleksii Bratash, Ali Maziz, Cloé Desmet, Ricardo Alvarado Meza, et al.. Rapid prototyping of a polymer MEMS droplet dispenser by laser-assisted 3D printing. Microsystems & Nanoengineering, 2023, 9 (1), pp.85. ⟨10.1038/s41378-023-00559-3⟩. ⟨hal-04266785⟩

Matthieu Sagot, Elise Bou, David Bourrier, Aline Cerf, Hervé Aubert, et al.. Bio-Impedance Spectroscopy of Retained Cells Using a Micro-Perforated Sensing Membrane Filtrating Whole Blood Samples under High Flowrate. Biosensors, 2023, 13 (12), pp.996. ⟨10.3390/bios13120996⟩. ⟨hal-04299355⟩

Elise Rigot. Face à la sixième extinction : faire oeuvre de mémoire ?. Analyse Opinion Critique, 2023. ⟨hal-04469096⟩

Ophélie Thomas- -Chemin, Childérick Séverac, Emmanuelle Trévisiol, Etienne Dague. Indentation of living cells by AFM tips may not be what we thought!. Micron, 2023, 174, pp.103523. ⟨10.1016/j.micron.2023.103523⟩. ⟨hal-04193549⟩

Victor Fournié, Bastien Venzac, Emmanuelle Trevisiol, Julie Foncy, Julien Roul, et al.. A microfluidics-assisted photopolymerization method for high-resolution multimaterial 3D printing. Additive Manufacturing, 2023, 72, pp.103629. ⟨10.1016/j.addma.2023.103629⟩. ⟨hal-04116522⟩

Easter Ndlovu, Lucas Malpartida, Taranum Sultana, Tanya Dahms, Etienne Dague. Host Cell Geometry and Cytoskeletal Organization Governs Candida-Host Cell Interactions at the Nanoscale. ACS Applied Materials & Interfaces, 2023, 15 (44), pp.50789-50798. ⟨10.1021/acsami.3c09870⟩. ⟨hal-04244012⟩

Claire Lac, Julie Foncy, Corinne Bousquet, Laurent Malaquin, Morgan Delarue, et al.. Do mechanical forces induce a protumoural dialogue between the tumour and the adjacent healthy tissue?. Pancreatology, 2023, 23, pp.e23. ⟨10.1016/j.pan.2023.06.460⟩. ⟨hal-04729109⟩

Elise Rigot. Incarner une objectivité féministe via un média de publication scientifique.. Design, Arts, Médias, 2023, Femmes de sciences. ⟨hal-04469234⟩

Conference papers

Elise Rigot. To'a Balade en forêt de corail. LABEX Corail, Serge Planes, Dec 2023, Paris, France. ⟨hal-04473774⟩

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. Do mechanical forces induce a protumoral dialogue between the tumor and the adjacent healthy tissue?. International Pancreatic Cancer Symposium 2023, Oct 2023, Bordeaux, France. ⟨hal-04834780⟩

Other documents

Matthieu Sagot, Elise Bou, Timothée Derkenne, C. Tregouet, Vincent Raimbault, et al.. Function integration in 3D-Printed µFluidics using a "Print Pause Print" Strategy. MicroTAS, Oct 2023, Katowice, Poland. 2023. ⟨hal-04623218⟩

Elise Rigot. Retour d'expédition Océan indien, une expérience sensible. 2023. ⟨hal-04491945⟩

Mohammad Hussein Baz, Lucas Charpin, Coralie Sengenès, Emmanuelle Trévisiol, Anne Marie Gué. Lab-on-a-chip for Isolating Circulating Adipose Stromal Cells: Pre-processing Module. International Symposium on Microscale Separations and Bioanalysis (MSB), May 2023, Tallahassee, Florida, United States. , 2023. ⟨hal-04117613⟩

Matthieu Sagot, Bastien Venzac, David Bourrier, Aurélie Lecestre, Adrian Laborde, et al.. 3D Integration of a µSieve for Particle Filtration Combined with real-time in-situ Analysis within Complex Media. Micro and Nano Engineering Conference 2023, Sep 2023, Berlin, Germany. , 2023. ⟨hal-04582810⟩

Reports

Valentin Fonvieille, Ophélie Thomas- -Chemin, Etienne Dague. Synchronize cells in the cell cycle phases to correlate with their heterogeneous biomechanical properties. LAAS-CNRS. 2023. ⟨hal-04918798⟩

2022

Journal articles

Lucile Alexandre, Amel Bendali, Iago Pereiro, Madad Azimani, Simon Dumas, et al.. Modular microfluidic system for on-chip extraction, preconcentration and detection of the cytokine biomarker IL-6 in biofluid. Scientific Reports, 2022, 12 (1), pp.9468. ⟨10.1038/s41598-022-13304-z⟩. ⟨hal-03852750⟩

Annija Lace, Aideen Byrne, Simon Bluett, Laurent Malaquin, Vincent Raimbault, et al.. Ion chromatograph with three‐dimensional printed absorbance detector for indirect ultraviolet absorbance detection of phosphate in effluent and natural waters. Journal of Separation Science, 2022, 45 (5), pp.1042-1050. ⟨10.1002/jssc.202100897⟩. ⟨hal-03796005⟩

Baptiste Alric, Cécile Formosa-Dague, Etienne Dague, Liam J Holt, Morgan Delarue. Macromolecular crowding limits growth under pressure. Nature Physics, 2022, ⟨10.1038/s41567-022-01506-1⟩. ⟨hal-03428857⟩

Soon-Hwan Oh, Hélène Martin-Yken, David A Coleman, Etienne Dague, Lois L Hoyer. Development and Use of a Monoclonal Antibody Specific for the Candida albicans Cell-Surface Protein Hwp1. Frontiers in Cellular and Infection Microbiology, 2022, 12, pp.907453. ⟨10.3389/fcimb.2022.907453⟩. ⟨hal-03706826⟩

Gozde Eke, Laurence Vaysse, Xi Yao, Mélanie Escudero, Audrey Carrière, et al.. Cell Aggregate Assembly through Microengineering for Functional Tissue Emergence. Cells, 2022, 11 (9), pp.1394. ⟨10.3390/cells11091394⟩. ⟨hal-03675727⟩

Victor Fabre, Franck Carcenac, Adrian Laborde, Jean Baptiste Doucet, Christophe Vieu, et al.. Hierarchical Superhydrophobic Device to Concentrate and Precisely Localize Water-Soluble Analytes: A Route to Environmental Analysis. Langmuir, 2022, 38 (46), pp.14249-14260. ⟨10.1021/acs.langmuir.2c01690⟩. ⟨hal-03880333⟩

Sergio Andrés Torres-Pérez, Luis Vallejo-Castillo, Said Vázquez-Leyva, Luis Gerardo Zepeda-Vallejo, José Enrique Herbert-Pucheta, et al.. Structural and Physicochemical Characteristics of One-Step PAMAM Dendrimeric Nanoparticles. Colloids and Surfaces A: Physicochemical and Engineering Aspects, 2022, 633, Part 1, pp.127819. ⟨10.1016/j.colsurfa.2021.127819⟩. ⟨hal-03434714⟩

Irem Demir-Yilmaz, Nadiia Yakovenko, Clément Roux, Pascal Guiraud, Fabrice Collin, et al.. The role of microplastics in microalgae cells aggregation: a study at the molecular scale using atomic force microscopy. Science of the Total Environment, 2022, 832, ⟨10.1016/j.scitotenv.2022.155036⟩. ⟨hal-03638059⟩

Etienne Dague, Véronique Pons, Alexandre Roland, Jean-Marc Azaïs, Silvia Arcucci, et al.. Atomic force microscopy-single-molecule force spectroscopy unveils GPCR cell surface architecture. Communications Biology, 2022, 5 (1), ⟨10.1038/s42003-022-03162-w⟩. ⟨hal-03619367⟩

Marion Portes, Thomas Mangeat, Natacha Escallier, Ophélie Dufrancais, Brigitte Raynaud-Messina, et al.. Nanoscale architecture and coordination of actin cores within the sealing zone of human osteoclasts. eLife, 2022, 11, pp.e75610. ⟨10.7554/eLife.75610⟩. ⟨hal-03763496⟩

Book sections

Anthony Masure, Elise Rigot. Troubler les programmes. Design, cybernétique et biologie moléculaire. Les écologies du numérique, 2022. ⟨halshs-04100492⟩

Conference papers

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. Do mechanical forces promote tumor progression via the establishment of a dialogue between the tumor and adjacent healthy tissue?. Journée de l'Association Française de Recherche sur le Cancer du Pancréas, Oct 2022, Paris, France. ⟨hal-04834760⟩

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. 3D device to decipher the impact of tumoral compressive solid stress on adjacent tissue. Les Translationnelles du GSO - Cancer du Pancréas, Dec 2022, Toulouse, France. ⟨hal-04834772⟩

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. Les forces mécaniques induisent-elles un dialogue protumoral entre la tumeur et le tissu sain adjacent ?. XXXVIème réunion du Club Français du Pancréas, Sep 2022, Paris, France. ⟨hal-04834757⟩

E. Raude, E. Pagès, M. Meseguer, M. Pastore, P. Descargues, et al.. 418 A novel automated solution to study biotherapeutics infusion and pharmacokinetics within human skin. 51st Annual Meeting of the European-Society-for-Dermatological-Research (ESDR), European Soc Dermatol Res, Sep 2022, Amsterdam, Netherlands. pp.418, ⟨10.1016/j.jid.2022.09.431⟩. ⟨hal-04982686⟩

Etienne Dague. Biophysics at the biological interfaces using Atomic Froce Microscopy. International Symposium on Advances in Pharmaceutical Analysis (APA2020), Jun 2022, Nancy, France. ⟨hal-03705447⟩

Elise Rigot, Denis Tribouillois, Guillaume Barbareau, Julie Foncy, Jean-Marc Larré, et al.. Advanced 3D technologies applied to coral skeletons structures for generating an open science archive Corallum fabrica. International Coral Reef Symposium (ICRS 2022), Christian R Voolstra, Jul 2022, Bremen (DE), Germany. ⟨hal-04473711⟩

Ophélie Thomas- -Chemin, Etienne Dague, Childérick Séverac, Emmanuelle Trévisiol. AutoBioTip: Towards automation of mechanobiological measurements by AFM. NANOinBIO 2022, May 2022, Le Gosier, France. ⟨hal-03697966⟩

Other documents

Matthieu Sagot, Elise Bou, David Bourrier, Aline Cerf, Hervé Aubert, et al.. Micro-perforated membrane for label-free cell capture and integrated electrical detection operating in whole blood. 2022. ⟨hal-04582845⟩

Abderazzak Moumen, Marie-Véronique Le Lann, Etienne Dague, Ophélie Thomas- -Chemin. Automatisation des mesures mécanobiologiques par Microscopie à Force Atomique (AFM). Sondes locales, Jun 2022, Saint-Valery-sur-Somme, France. 2022. ⟨hal-04944827⟩

Elise Rigot. Rituels pour architectures coralliennes. 2022. ⟨hal-04491966⟩

2021

Journal articles

Irem Demir, Ines Lüchtefeld, Claude Lemen, Etienne Dague, Pascal Guiraud, et al.. Probing the interactions between air bubbles and (bio)interfaces at the nanoscale using FluidFM technology. Journal of Colloid and Interface Science, 2021, 604, pp.785-797. ⟨10.1016/j.jcis.2021.07.036⟩. ⟨hal-03423284⟩

Sophie Klemm, Martina Baum, Haoyi Qiu, Zibin Nan, Mafalda Cavalheiro, et al.. Development of Polythiourethane/ZnO-Based Anti-Fouling Materials and Evaluation of the Adhesion of Staphylococcus aureus and Candida glabrata Using Single-Cell Force Spectroscopy. Nanomaterials, 2021, 11 (2), pp.271. ⟨10.3390/nano11020271⟩. ⟨hal-03136104⟩

Elise Rigot. Fragment(s) - Mémoire des architectures coralliennes. Billebaude, 2021, 19. ⟨hal-04469178⟩

Justine Creff, Laurent Malaquin, Arnaud Besson. In vitro models of intestinal epithelium: towards bioengineered systems. Hospitals, 2021, 12, pp.2041731420985202. ⟨10.1177/2041731420985202⟩. ⟨hal-03366154⟩

Ibrahima Drame, Christine Lafforgue, Cécile Formosa-Dague, Marie-Pierre Chapot-Chartier, Jean-Christophe Piard, et al.. Pili and other surface proteins influence the structure and the nanomechanical properties of Lactococcus lactis biofilms. Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-84030-1⟩. ⟨hal-03163203⟩

Elise Rigot. Vampyroteuthis Infernalis as Bioluminescent Lighthouse to Think among the Living.. Flusser Studies, 2021, Vilém Flusser and His “Languages”, 30. ⟨hal-03197472⟩

Lauriane Onfroy-Roy, Dimitri Hamel, Laurent Malaquin, Audrey Ferrand. Colon Fibroblasts and Inflammation: Sparring Partners in Colorectal Cancer Initiation?. Cancers, 2021, 13 (8), ⟨10.3390/cancers13081749⟩. ⟨hal-03206676⟩

Childérick Séverac, Sergio Proa-Coronado, Adrian Martinez-Rivas, Cécile Formosa-Dague, Etienne Dague. Automation of Bio-Atomic Force Microscope Measurements on Hundreds of C. albicans Cells. Journal of visualized experiments : JoVE, 2021, 170, ⟨10.3791/61315⟩. ⟨hal-03025337⟩

Elise Rigot. Vampyroteuthis Infernalis, le podcast comme format de recherche-création. Flusser Studies, 2021, Flusser et la France, 31. ⟨hal-03335819⟩

Clara Bouyx, Marion Schiavone, Marie-Ange Teste, Etienne Dague, Nathalie Sieczkowski, et al.. The dual role of amyloid-β-sheet sequences in the cell surface properties of FLO11-encoded flocculins in Saccharomyces cerevisiae. eLife, 2021, 10, pp.e68592. ⟨10.7554/eLife.68592⟩. ⟨hal-03434693⟩

Juan Carlos C Camacho-Fernández, Génesis Karendash González Quijano, Childerick Severac, Etienne Dague, Véronique Gigoux, et al.. Nanobiomechanical behavior of Fe3O4@SiO2 and Fe3O4@SiO2-NH2 nanoparticles over HeLa cells interfaces. Nanotechnology, 2021, 32 (38), pp.385702. ⟨10.1088/1361-6528/ac0a13⟩. ⟨hal-03260468⟩

Jeleel Opeyemi Agboola, Marion Schiavone, Margareth Øverland, Byron Morales-Lange, Leidy Lagos, et al.. Impact of down-stream processing on functional properties of yeasts and the implications on gut health of Atlantic salmon (Salmo salar). Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-83764-2⟩. ⟨hal-03261870⟩

Easter Ndlovu, Tanya Dahms, Etienne Dague. Elucidating the Nanoscale Effect of Cell Geometry and Cytoskeleton Organization on Candida-Host Cell Interactions. Biophysical Journal, 2021, 120 (3), pp.361a. ⟨10.1016/j.bpj.2020.11.2231⟩. ⟨hal-04867078⟩

Weijing Han, Rania El Botty, Elodie Montaudon, Laurent Malaquin, Frederic Deschaseaux, et al.. In vitro bone metastasis dwelling in a 3D bioengineered niche. Biomaterials, 2021, 269, pp.120624. ⟨10.1016/j.biomaterials.2020.120624⟩. ⟨hal-03216087⟩

Irem Demir, Pascal Guiraud, Cécile Formosa-Dague. The contribution of Atomic Force Microscopy (AFM) in microalgae studies: A review. Algal Research - Biomass, Biofuels and Bioproducts, 2021, 60, pp.102506. ⟨10.1016/j.algal.2021.102506⟩. ⟨hal-03423286⟩

Karen Dunker, Sol Gomez de La Torre Canny, Catherine Taylor Nordgård, Etienne Dague, Cécile Formosa-Dague, et al.. Elucidating bacterial adhesion to mucosal surface by an original AFM approach. BMC Microbiology, 2021, 21 (1), ⟨10.1186/s12866-021-02303-1⟩. ⟨hal-03347159⟩

Laurent Malaquin, Morgan Delarue, Anne Marie Gué. Les « systèmes micro-physiologique » : des outils pour modéliser le vivant. Le petit illustré, regards croisés de chercheur.es, 2021. ⟨hal-03459155⟩

Mafalda Cavalheiro, Diana Pereira, Cécile Formosa-Dague, Carolina Leitão, Pedro Pais, et al.. From the first touch to biofilm establishment by the human pathogen Candida glabrata: a genome-wide to nanoscale view. Communications Biology, 2021, 4 (1), ⟨10.1038/s42003-021-02412-7⟩. ⟨hal-03328637⟩

Mouhanad Babi, Roberto Riesco, Louisa Boyer, Ayodele Fatona, Angelo Accardo, et al.. Tuning the Nanotopography and Chemical Functionality of 3D Printed Scaffolds through Cellulose Nanocrystal Coatings. ACS Applied Bio Materials, 2021, 4 (12), pp.8443-8455. ⟨10.1021/acsabm.1c00970⟩. ⟨hal-03547189⟩

Conference papers

Etienne Dague. Biomedical Applications of Atomic Force Microscopy. MSC-SMC-2021, microscopical society of Canada, Jun 2021, Hamilton (online), Canada. ⟨hal-03260476⟩

Irem Demir, Jonas Blockx, Etienne Dague, Pascal Guiraud, Koenraad Muylaert, et al.. Understanding chitosan-induced flocculation mechanism in C. vulgaris using atomic force microscopy (AFM). International confenrence on Biomass, Bioproducts and Biofuels (AlgalBBB 2021), Jun 2021, Virtuel, United Kingdom. ⟨hal-03430080⟩

Irem Demir, Ines Lüchtefeld, Claude Lemen, Etienne Dague, Pascal Guiraud, et al.. Probing the interactions between air bubbles and (bio)-interfaces at the molecular scale using FluidFM technology. Colloque de la Société française des Microscopies (Sfµ), Jul 2021, Reims (Virtuel), France. ⟨hal-03430090⟩

Elise Rigot. Vampyroteuthis as a bioluminescent lighthouse to think under the livings.. Vilém Flusser and His “Languages”, Anita Jóri, Vilém Flusser Archive, Jun 2020, Berlin, Germany. https://www.flusserstudies.net/sites/www.flusserstudies.net/files/media/attachments/rigot-vampyroteuthis-infernalis.pdf. ⟨hal-04473680⟩

Ibrahima Drame, Jean-Christophe Piard, Marie-Pierre Chapot-Chartier, Christine Lafforgue, Etienne Dague, et al.. Pili drive homotypic interactions to form biofilm in Lactococcus lactis : A single-molecule force spectroscopy study. 7ème journée thématique du GDR B2i, Vincent Humblot, Sep 2021, Toulouse, France. ⟨hal-04783455⟩

Pauline Lefebvre, Vincent Mansard, Laurent Malaquin, P. Assemat, Pascal Swider. How mechanical strain might modify transport properties of a biological tissue-mimicking porous media; an experimental approach. 15eme Journée d'Etude des Milieux Poreux, Oct 2021, Starsbourg, France. ⟨hal-04878613⟩

Etienne Dague, Sergio Proa Coronado, Childérick Séverac, Adrian Martinez Rivas. Beyond the paradigm of nanomechanical measurements on cells using AFM: an automated methodology to rapidly analyse thousands of cells. C'Nano The Nanoscience meeting, Nov 2021, Toulouse, France. ⟨hal-03470311⟩

Other documents

Irem Demir, Ines Lüchtefeld, Claude Lemen, Etienne Dague, Pascal Guiraud, et al.. Probing the interactions between bubbles (gas / liquid) and (bio)interfaces at the molecular scale using FluidFM technology. Journées plénières du GDR Bioingénierie des Interfaces (B2I), Sep 2021, Toulouse, France. ⟨hal-03429997⟩

Elise Rigot, Christophe Vieu. Engineering Materials for Regenerative Medicine: A time issue. 2021. ⟨hal-03319094v2⟩

Reports

Ophélie Thomas- -Chemin, Etienne Dague, Emmanuelle Trévisiol, Childérick Séverac. Automated measurement of mechanobiological properties of cells by atomic force microscopy (AFM). LAAS-CNRS. 2021. ⟨hal-04918727⟩

2020

Journal articles

Onesto Valentina, Angelo Accardo, Christophe Vieu, Gentile Francisco. Small-world networks of neuroblastoma cells cultured in three-dimensional polymeric scaffolds featuring multi-scale roughness. Neural Regeneration Research, 2020, 15 (4), pp.759. ⟨10.4103/1673-5374.266923⟩. ⟨hal-04887857⟩

Alejandro Kayum Jimenez Zenteno, Aline Cerf. Liquid Biopsy Based on Circulating Cancer‐Associated Cells: Bridging the Gap from an Emerging Concept to a Mainstream Tool in Precision Medicine. Advanced Biosystems, 2020, 4 (2), pp.1900164. ⟨10.1002/adbi.201900164⟩. ⟨hal-03098405⟩

Anaïs Chalard, Morgane Mauduit, Sandrine Assié-Souleille, Pierre Joseph, Laurent Malaquin, et al.. 3D printing of a biocompatible low molecular weight supramolecular hydrogel by dimethylsulfoxide water solvent exchange. Additive Manufacturing, 2020, 33, pp.101162. ⟨10.1016/j.addma.2020.101162⟩. ⟨hal-02540295⟩

S. Proa-Coronado, Childérick Séverac, A. Martinez-Rivas, Etienne Dague. Beyond the paradigm of nanomechanical measurements on cells using AFM: an automated methodology to rapidly analyse thousands of cells. Nanoscale Horizons, 2020, 5 (1), pp.131-138. ⟨10.1039/C9NH00438F⟩. ⟨hal-03025101⟩

Mario Piedrahita-Bello, José Elias Angulo-Cervera, Rémi Courson, Gábor Molnár, Laurent Malaquin, et al.. 4D printing with spin-crossover polymer composites. Journal of Materials Chemistry C, 2020, 18 (8), pp.6001-6005. ⟨10.1039/d0tc01532f⟩. ⟨hal-02570972⟩

Pierre-Louis Taberna, Reasmey Phary Tan, Cherif Rouabhi, Christophe Capello, Julien Schauber, et al.. Practical Works on Nanotechnology: Middle School to Undergraduate Students. IEEE Nanotechnology Magazine, 2020, 14 (4), pp.21-28. ⟨10.1109/mnano.2020.2994822⟩. ⟨hal-03411537⟩

Ibrahima Dramé, Cécile Formosa-Dague, Marie-Pierre Chapot-Chartier, Jean-Christophe Piard, Mickaël Castelain, et al.. Analysis of Homotypic Interactions of Lactococcus lactis Pili Using Single-Cell Force Spectroscopy. ACS Applied Materials & Interfaces, 2020, 12 (19), pp.21411-21423. ⟨10.1021/acsami.0c03069⟩. ⟨hal-02860018⟩

Irem Demir, Jonas Blockx, Etienne Dague, Pascal Guiraud, Wim Thielemans, et al.. Nanoscale Evidence Unravels Microalgae Flocculation Mechanism Induced by Chitosan. ACS Applied Bio Materials, 2020, 3 (12), pp.8446-8459. ⟨10.1021/acsabm.0c00772⟩. ⟨hal-03025212⟩

Elise Rigot, Jonathan Justin Strayer. Retour vers 1972 : rouvrir les possibles pour le design et l’économie face aux effondrements. Sciences du Design, 2020, 2020/1 (11), pp.32-41. ⟨10.3917/sdd.011.0032⟩. ⟨hal-02892484⟩

Lauriane Onfroy-Roy, Dimitri Hamel, Julie Foncy, Laurent Malaquin, Audrey Ferrand. Extracellular Matrix Mechanical Properties and Regulation of the Intestinal Stem Cells: When Mechanics Control Fate. Cells, 2020, 9 (12), ⟨10.3390/cells9122629⟩. ⟨hal-03128878⟩

Petra Jusková, Lionel Matthys, Jean-Louis Viovy, Laurent Malaquin. 3D deterministic lateral displacement (3D-DLD) cartridge system for high throughput particle sorting. Chemical Communications, 2020, 56 (38), pp.5190-5193. ⟨10.1039/C9CC05858C⟩. ⟨hal-02547068⟩

Bastien Venzac, Yang Liu, Ivan Ferrante, Pablo Vargas, Ayako Yamada, et al.. Sliding walls: a new paradigm for fluidic actuation and protocol implementation in microfluidics. Microsystems & Nanoengineering, 2020, 6 (1), ⟨10.1038/s41378-019-0125-7⟩. ⟨hal-03041894v2⟩

Conference papers

Lac Claire, Julie Foncy, Laurent Malaquin, Corinne Bousquet, Morgan Delarue, et al.. Impact de la mécanique sur le stroma dans le cas du cancer du pancréas. Workshop "Matrice extracellulaire & Cancer", Sep 2020, Toulouse, France. ⟨hal-04834102⟩

Irem Demir, Ines Lüchtefeld, Claude Lemen, Pascal Guiraud, Etienne Dague, et al.. Fluidic force microscopy to access the interactions between gaz/liquid and biological interfaces. Microbe-on-chip, Oct 2020, Toulouse (on line), France. ⟨hal-03428273⟩

Preprints, Working Papers, ...

Lucie Albert, Emmanuelle Trévisiol, Christophe Vieu. Surface bio-pattern characterization - Nanoscale analysis of surface bio-patterning using SEEC technology. 2020. ⟨hal-02392798⟩