Ingénierie pour les sciences du vivant

- elia -


L’équipe ELiA mène des projets de recherche interdisciplinaires à l’interface entre les micro et nanotechnologies, la biologie, la biophysique et les applications médicales. Nous développons des technologies innovantes pour l'étude des bio-interfaces, l'organisation de biomolécules et de cellules pour la réalisation d'architectures 2D et 3D et le développement de dispositifs d'analyse.


Chapo

Mécanobiologie multiéchelle

> Mécanobiologie des macrophages humains primaires > Automatisation des mesures mécanobiologiques par l'AFM pour différenciation cellulaireM

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Bioingénierie pour l’émergence de fonctions tissulaires

> Etude et développement d’un modèle 3D de matrice extra cellulaire par impression 3D haute résolution > Bioimpression multmatériaux et multirésolution > Modèles de tissus pour l’étude du métabolisme et la régénération du tissu adipeux

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Sensing and Monitoring

Molecular and cellular sensing for monitoring and diagnostic purposes

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Design in Life Sciences

> Corallum Fabrica > Bio is the new black

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Dernières Publications

2025

Articles dans une revue

Oleksii Bratash, Rémi Courson, Laurent Malaquin, Thierry Leichle, Arnaud Buhot, et al.. Multiplexed Bio‐detection on an Interferometric Optical Waveguide Assembly. Advanced Materials Interfaces, 2025, ⟨10.1002/admi.202400941⟩. ⟨hal-04929729⟩

2024

Articles dans une revue

Ibrahima Dramé, Yannick Rossez, Frederic Krzewinski, Nicolas Charbonnel, Laurence Ollivier-Nakusi, et al.. FabR, a regulator of membrane lipid homeostasis, is involved in Klebsiella pneumoniae biofilm robustness. mBio, In press, 0, ⟨10.1128/mbio.01317-24⟩. ⟨hal-04698805⟩

Gorkem Bakir, Tanya E S Dahms, Hélène Martin-Yken, Hans A Bechtel, Kathleen M Gough. Saccharomyces cerevisiae CellWall Remodeling in the Absence of Knr4 and Kre6 Revealed by Nano-FourierTransform Infrared Spectroscopy. Applied Spectroscopy, 2024, 78 (4), pp.355-364. ⟨10.1177/00037028231213658⟩. ⟨hal-04472218⟩

Charlotte da Silva, Camille Lamarche, Carole Pichereaux, Emmanuelle Mouton-Barbosa, Gauthier Demol, et al.. Bacterial eradication by a low-energy pulsed electron beam generator. Bioelectrochemistry, 2024, 156, pp.108593. ⟨10.1016/j.bioelechem.2023.108593⟩. ⟨hal-04735507⟩

Christos I. Papadopoulos, Larue Anne Edith, Clara Toulouze, Omar Mokhtari, Julien Lefort, et al.. A versatile micromodel technology to explore biofilm development in porous media flows. Lab on a Chip, 2024, 24 (2), pp.254-271. ⟨10.1039/D3LC00293D⟩. ⟨hal-04798978⟩

Laria Rodríguez-Quesada, Karla Ramírez-Sánchez, Cécile Formosa-Dague, Etienne Dague, Giovanni Sáenz-Arce, et al.. Evaluation of Conductive Porous Biobased Composites with Tunable Mechanical Properties for Potential Biological Applications. ACS Omega, 2024, 9 (43), pp.43426-43437. ⟨10.1021/acsomega.4c04391⟩. ⟨hal-04750246⟩

Elise Rigot, Lorenzo Bramanti. Les forêts animales marines, une rencontre fertile. Arts et sciences, 2024, 8 : Arts et Sciences (Numéro spécial OOB), pp.80-91. ⟨10.21494/ISTE.OP.2024.1116⟩. ⟨hal-04503543⟩

Matthieu Sagot, Timothée Derkenne, Perrine Giunchi, Yohan Davit, Jean-Philippe Nougayrède, et al.. Functionality integration in stereolithography 3D printed microfluidics using a “print-pause-print” strategy. Lab on a Chip, 2024, 24 (14), pp.3508-3520. ⟨10.1039/D4LC00147H⟩. ⟨hal-04632660⟩

Ophélie Thomas- -Chemin, Childérick Séverac, Abderazzak Moumen, Adrian Martinez Rivas, Christophe Vieu, et al.. Automated bio-AFM generation of large mechanome data set and their analysis by machine learning to classify cancerous cell lines. ACS Applied Materials & Interfaces, 2024, 16 (34), pp.44504-44517. ⟨10.1021/acsami.4c09218⟩. ⟨hal-04674006⟩

L. Giraud, Olivier Marsan, E. Dague, M. Ben-Neji, Céline Cougoule, et al.. Surface-anchored carbon nanomaterials for antimicrobial surfaces. Nanoscale, 2024, 35 (16), pp.16517-16534. ⟨10.1039/d4nr02810d⟩. ⟨hal-04685264⟩

Chapitres d’ouvrages

Elise Rigot, Christophe Vieu. Corallum fabrica : une archive vivante comme média d’encapacitation pour la recherche scientifique. CNRS. Design et communication - Créations collectives, CNRS Editions, 2024, Les Essentiels d'Hermès, 978-2-271-14964-0. ⟨hal-04469439⟩

Communications dans un congrès

Claire Lac, Pauline Thomas, Julie Foncy, Marjorie Fanjul, Laurent Malaquin, et al.. Tumoral mechanical stress reprograms adjacent tissue micro-environment to fuel pancreatic tumor progression: identification of a new subtype of activated fibroblasts.. Journée de l'Association Française pour la Recherche sur le Cancer du Pancréas., Sep 2024, Toulouse, France. ⟨hal-04834786⟩

Autres documents

Elise Rigot. Le Vampyroteuthis infernalis comme un phare bioluminescent pour penser parmi les vivants. Quelques mutations : De 1981 à 1991. 2024. ⟨hal-04512920⟩

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. Dialogue between pancreatic tumor and adjacent tissue: a relationship under pressure. Micro-physiological models: From organoids to organs-on-chip, Sep 2024, Cargèse, France. 2024. ⟨hal-04834165⟩

M Sagot, D Rojas, David Bourrier, A Arcas, A Ferrand, et al.. Clip-Chips: 3D printed microfluidic and characterization modules for cell culture applications. NanoBioTech 2024, Nov 2024, Montreux (Switzerland), Switzerland. 2024. ⟨hal-04885986⟩

Ophélie Thomas- -Chemin, Childérick Séverac, Yara Abidine, Emmanuelle Trévisiol, Etienne Dague. Machine learning (ML) classification of cells on the basis of their viscoelastic properties. European Microscopy Congress (EMC 2024), Aug 2024, Copenhague, Denmark. , 2024. ⟨hal-04673995⟩

Pré-publications, documents de travail

Victoria Passucci, Ophélie Thomas--Chemin, Omar Dib, Antony Ali Assaf, Marie-José Durand, et al.. Investigating the role of extracellular polymeric substances produced by Parachlorella kessleri in Zn(II) bioremediation using atomic force microscopy. 2024. ⟨hal-04745729⟩

2023

Articles dans une revue

Mélanie Escudero, Laurence Vaysse, Gozde Eke, Marion Peyrou, Francesc Villarroya, et al.. Scalable Generation of Pre‐Vascularized and Functional Human Beige Adipose Organoids. Advanced Science, 2023, 10 (31), pp.e2301499. ⟨10.1002/advs.202301499⟩. ⟨hal-04266619v2⟩

Rémi Courson, Oleksii Bratash, Ali Maziz, Cloé Desmet, Ricardo Alvarado Meza, et al.. Rapid prototyping of a polymer MEMS droplet dispenser by laser-assisted 3D printing. Microsystems & Nanoengineering, 2023, 9 (1), pp.85. ⟨10.1038/s41378-023-00559-3⟩. ⟨hal-04729110⟩

Irem Demir-Yilmaz, Marion Schiavone, Jérôme Esvan, Pascal Guiraud, Cécile Formosa-Dague. Combining AFM, XPS and chemical hydrolysis to understand the complexity and dynamics of C. vulgaris cell wall composition and architecture. Algal Research - Biomass, Biofuels and Bioproducts, 2023, 72, pp.103102. ⟨10.1016/j.algal.2023.103102⟩. ⟨hal-04285172v2⟩

Claire Lac, Julie Foncy, Corinne Bousquet, Laurent Malaquin, Morgan Delarue, et al.. Do mechanical forces induce a protumoural dialogue between the tumour and the adjacent healthy tissue?. Pancreatology, 2023, 23, pp.e23. ⟨10.1016/j.pan.2023.06.460⟩. ⟨hal-04729109⟩

Matthieu Sagot, Elise Bou, David Bourrier, Aline Cerf, Hervé Aubert, et al.. Bio-Impedance Spectroscopy of Retained Cells Using a Micro-Perforated Sensing Membrane Filtrating Whole Blood Samples under High Flowrate. Biosensors, 2023, 13 (12), pp.996. ⟨10.3390/bios13120996⟩. ⟨hal-04299355⟩

Maja Levak Zorinc, Irem Demir-Yilmaz, Cécile Formosa-Dague, Ivna Vrana, Blaženka Gašparović, et al.. Reconstructed membrane vesicles from the microalga Dunaliella as a potential drug delivery system. Bioelectrochemistry, 2023, 150, pp.108360. ⟨10.1016/j.bioelechem.2022.108360⟩. ⟨hal-04011755⟩

Ophélie Thomas- -Chemin, Childérick Séverac, Emmanuelle Trévisiol, Etienne Dague. Indentation of living cells by AFM tips may not be what we thought!. Micron, 2023, 174, pp.103523. ⟨10.1016/j.micron.2023.103523⟩. ⟨hal-04193549⟩

Victor Fournié, Bastien Venzac, Emmanuelle Trevisiol, Julie Foncy, Julien Roul, et al.. A microfluidics-assisted photopolymerization method for high-resolution multimaterial 3D printing. Additive Manufacturing, 2023, 72, pp.103629. ⟨10.1016/j.addma.2023.103629⟩. ⟨hal-04116522⟩

Easter Ndlovu, Lucas Malpartida, Taranum Sultana, Tanya Dahms, Etienne Dague. Host Cell Geometry and Cytoskeletal Organization Governs Candida-Host Cell Interactions at the Nanoscale. ACS Applied Materials & Interfaces, 2023, 15 (44), pp.50789-50798. ⟨10.1021/acsami.3c09870⟩. ⟨hal-04244012⟩

Irem Demir-Yilmaz, Malak Souad Ftouhi, Stéphane Balayssac, Pascal Guiraud, Christophe Coudret, et al.. Bubble functionalization in flotation process improve microalgae harvesting. Chemical Engineering Journal, 2023, 452 (part 2), ⟨10.1016/j.cej.2022.139349⟩. ⟨hal-03788878⟩

Elise Rigot. Incarner une objectivité féministe via un média de publication scientifique.. Design, Arts, Médias, 2023, Femmes de sciences. ⟨hal-04469234⟩

Elise Rigot. Face à la sixième extinction : faire oeuvre de mémoire ?. Analyse Opinion Critique, 2023. ⟨hal-04469096⟩

Abigail Burato Rosales, Nadège Durban-Benizio, Xuan Loc Nguyen, Vincent Bouvier, Clémentine Lamo, et al.. Minimizing bacterial adhesion on membrane: Multiscale characterization of surface modifications. Journal of Membrane Science, 2023, 684, pp.121867. ⟨10.1016/j.memsci.2023.121867⟩. ⟨hal-04137642⟩

Zacchari Ben Meriem, Tiphaine Mateo, Julien Faccini, Céline Denais, Romane Dusfour-Castan, et al.. A microfluidic mechano-chemostat for tissues and organisms reveals that confined growth is accompanied with increased macromolecular crowding. Lab on a Chip, 2023, 20, pp.4445-4455. ⟨10.1039/d3lc00313b⟩. ⟨hal-04214597⟩

Rémi Courson, Oleksii Bratash, Ali Maziz, Cloé Desmet, Ricardo Alvarado Meza, et al.. Rapid prototyping of a polymer MEMS droplet dispenser by laser-assisted 3D printing. Microsystems & Nanoengineering, 2023, 9 (1), pp.85. ⟨10.1038/s41378-023-00559-3⟩. ⟨hal-04266785⟩

Communications dans un congrès

Elise Rigot. To'a Balade en forêt de corail. LABEX Corail, Serge Planes, Dec 2023, Paris, France. ⟨hal-04473774⟩

Autres documents

Elise Rigot. Retour d'expédition Océan indien, une expérience sensible. 2023. ⟨hal-04491945⟩

Matthieu Sagot, Elise Bou, Timothée Derkenne, C. Tregouet, Vincent Raimbault, et al.. Function integration in 3D-Printed µFluidics using a "Print Pause Print" Strategy. MicroTAS, Oct 2023, Katowice, Poland. 2023. ⟨hal-04623218⟩

Matthieu Sagot, Bastien Venzac, David Bourrier, Aurélie Lecestre, Adrian Laborde, et al.. 3D Integration of a µSieve for Particle Filtration Combined with real-time in-situ Analysis within Complex Media. Micro and Nano Engineering Conference 2023, Sep 2023, Berlin, Germany. , 2023. ⟨hal-04582810⟩

Mohammad Hussein Baz, Lucas Charpin, Coralie Sengenès, Emmanuelle Trévisiol, Anne Marie Gué. Lab-on-a-chip for Isolating Circulating Adipose Stromal Cells: Pre-processing Module. International Symposium on Microscale Separations and Bioanalysis (MSB), May 2023, Tallahassee, Florida, United States. , 2023. ⟨hal-04117613⟩

Rapports

Valentin Fonvieille, Ophélie Thomas- -Chemin, Etienne Dague. Synchronize cells in the cell cycle phases to correlate with their heterogeneous biomechanical properties. LAAS-CNRS. 2023. ⟨hal-04918798⟩

2022

Articles dans une revue

Irem Demir-Yilmaz, Nadiia Yakovenko, Clément Roux, Pascal Guiraud, Fabrice Collin, et al.. The role of microplastics in microalgae cells aggregation: a study at the molecular scale using atomic force microscopy. Science of the Total Environment, 2022, 832, ⟨10.1016/j.scitotenv.2022.155036⟩. ⟨hal-03638059⟩

Etienne Dague, Véronique Pons, Alexandre Roland, Jean-Marc Azaïs, Silvia Arcucci, et al.. Atomic force microscopy-single-molecule force spectroscopy unveils GPCR cell surface architecture. Communications Biology, 2022, 5 (1), ⟨10.1038/s42003-022-03162-w⟩. ⟨hal-03619367⟩

Victor Fabre, Franck Carcenac, Adrian Laborde, Jean Baptiste Doucet, Christophe Vieu, et al.. Hierarchical Superhydrophobic Device to Concentrate and Precisely Localize Water-Soluble Analytes: A Route to Environmental Analysis. Langmuir, 2022, 38 (46), pp.14249-14260. ⟨10.1021/acs.langmuir.2c01690⟩. ⟨hal-03880333⟩

Baptiste Alric, Cécile Formosa-Dague, Etienne Dague, Liam J Holt, Morgan Delarue. Macromolecular crowding limits growth under pressure. Nature Physics, 2022, ⟨10.1038/s41567-022-01506-1⟩. ⟨hal-03428857⟩

Soon-Hwan Oh, Hélène Martin-Yken, David A Coleman, Etienne Dague, Lois L Hoyer. Development and Use of a Monoclonal Antibody Specific for the Candida albicans Cell-Surface Protein Hwp1. Frontiers in Cellular and Infection Microbiology, 2022, 12, pp.907453. ⟨10.3389/fcimb.2022.907453⟩. ⟨hal-03706826⟩

Lucile Alexandre, Amel Bendali, Iago Pereiro, Madad Azimani, Simon Dumas, et al.. Modular microfluidic system for on-chip extraction, preconcentration and detection of the cytokine biomarker IL-6 in biofluid. Scientific Reports, 2022, 12 (1), pp.9468. ⟨10.1038/s41598-022-13304-z⟩. ⟨hal-03852750⟩

Marion Portes, Thomas Mangeat, Natacha Escallier, Ophélie Dufrancais, Brigitte Raynaud-Messina, et al.. Nanoscale architecture and coordination of actin cores within the sealing zone of human osteoclasts. eLife, 2022, 11, pp.e75610. ⟨10.7554/eLife.75610⟩. ⟨hal-03763496⟩

Gozde Eke, Laurence Vaysse, Xi Yao, Mélanie Escudero, Audrey Carrière, et al.. Cell Aggregate Assembly through Microengineering for Functional Tissue Emergence. Cells, 2022, 11 (9), pp.1394. ⟨10.3390/cells11091394⟩. ⟨hal-03675727⟩

Annija Lace, Aideen Byrne, Simon Bluett, Laurent Malaquin, Vincent Raimbault, et al.. Ion chromatograph with three‐dimensional printed absorbance detector for indirect ultraviolet absorbance detection of phosphate in effluent and natural waters. Journal of Separation Science, 2022, 45 (5), pp.1042-1050. ⟨10.1002/jssc.202100897⟩. ⟨hal-03796005⟩

Sergio Andrés Torres-Pérez, Luis Vallejo-Castillo, Said Vázquez-Leyva, Luis Gerardo Zepeda-Vallejo, José Enrique Herbert-Pucheta, et al.. Structural and Physicochemical Characteristics of One-Step PAMAM Dendrimeric Nanoparticles. Colloids and Surfaces A: Physicochemical and Engineering Aspects, 2022, 633, Part 1, pp.127819. ⟨10.1016/j.colsurfa.2021.127819⟩. ⟨hal-03434714⟩

Chapitres d’ouvrages

Anthony Masure, Elise Rigot. Troubler les programmes. Design, cybernétique et biologie moléculaire. Les écologies du numérique, 2022. ⟨halshs-04100492⟩

Communications dans un congrès

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. Les forces mécaniques induisent-elles un dialogue protumoral entre la tumeur et le tissu sain adjacent ?. XXXVIème réunion du Club Français du Pancréas, Sep 2022, Paris, France. ⟨hal-04834757⟩

Ophélie Thomas- -Chemin, Etienne Dague, Childérick Séverac, Emmanuelle Trévisiol. AutoBioTip: Towards automation of mechanobiological measurements by AFM. NANOinBIO 2022, May 2022, Le Gosier, France. ⟨hal-03697966⟩

Etienne Dague. Biophysics at the biological interfaces using Atomic Froce Microscopy. International Symposium on Advances in Pharmaceutical Analysis (APA2020), Jun 2022, Nancy, France. ⟨hal-03705447⟩

Elise Rigot, Denis Tribouillois, Guillaume Barbareau, Julie Foncy, Jean-Marc Larré, et al.. Advanced 3D technologies applied to coral skeletons structures for generating an open science archive Corallum fabrica. International Coral Reef Symposium (ICRS 2022), Christian R Voolstra, Jul 2022, Bremen (DE), Germany. ⟨hal-04473711⟩

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. Do mechanical forces promote tumor progression via the establishment of a dialogue between the tumor and adjacent healthy tissue?. Journée de l'Association Française de Recherche sur le Cancer du Pancréas, Oct 2022, Paris, France. ⟨hal-04834760⟩

Claire Lac, Julie Foncy, Laurent Malaquin, Morgan Delarue, Corinne Bousquet, et al.. 3D device to decipher the impact of tumoral compressive solid stress on adjacent tissue. Les Translationnelles du GSO - Cancer du Pancréas, Dec 2022, Toulouse, France. ⟨hal-04834772⟩

Autres documents

Matthieu Sagot, Elise Bou, David Bourrier, Aline Cerf, Hervé Aubert, et al.. Micro-perforated membrane for label-free cell capture and integrated electrical detection operating in whole blood. 2022. ⟨hal-04582845⟩

Elise Rigot. Rituels pour architectures coralliennes. 2022. ⟨hal-04491966⟩

2021

Articles dans une revue

Ibrahima Drame, Christine Lafforgue, Cécile Formosa-Dague, Marie-Pierre Chapot-Chartier, Jean-Christophe Piard, et al.. Pili and other surface proteins influence the structure and the nanomechanical properties of Lactococcus lactis biofilms. Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-84030-1⟩. ⟨hal-03163203⟩

Mafalda Cavalheiro, Diana Pereira, Cécile Formosa-Dague, Carolina Leitão, Pedro Pais, et al.. From the first touch to biofilm establishment by the human pathogen Candida glabrata: a genome-wide to nanoscale view. Communications Biology, 2021, 4 (1), ⟨10.1038/s42003-021-02412-7⟩. ⟨hal-03328637⟩

Irem Demir, Pascal Guiraud, Cécile Formosa-Dague. The contribution of Atomic Force Microscopy (AFM) in microalgae studies: A review. Algal Research - Biomass, Biofuels and Bioproducts, 2021, 60, pp.102506. ⟨10.1016/j.algal.2021.102506⟩. ⟨hal-03423286⟩

Karen Dunker, Sol Gomez de La Torre Canny, Catherine Taylor Nordgård, Etienne Dague, Cécile Formosa-Dague, et al.. Elucidating bacterial adhesion to mucosal surface by an original AFM approach. BMC Microbiology, 2021, 21 (1), ⟨10.1186/s12866-021-02303-1⟩. ⟨hal-03347159⟩

Easter Ndlovu, Tanya Dahms, Etienne Dague. Elucidating the Nanoscale Effect of Cell Geometry and Cytoskeleton Organization on Candida-Host Cell Interactions. Biophysical Journal, 2021, 120 (3), pp.361a. ⟨10.1016/j.bpj.2020.11.2231⟩. ⟨hal-04867078⟩

Elise Rigot. Fragment(s) - Mémoire des architectures coralliennes. Billebaude, 2021, 19. ⟨hal-04469178⟩

Weijing Han, Rania El Botty, Elodie Montaudon, Laurent Malaquin, Frederic Deschaseaux, et al.. In vitro bone metastasis dwelling in a 3D bioengineered niche. Biomaterials, 2021, 269, pp.120624. ⟨10.1016/j.biomaterials.2020.120624⟩. ⟨hal-03216087⟩

Mouhanad Babi, Roberto Riesco, Louisa Boyer, Ayodele Fatona, Angelo Accardo, et al.. Tuning the Nanotopography and Chemical Functionality of 3D Printed Scaffolds through Cellulose Nanocrystal Coatings. ACS Applied Bio Materials, 2021, 4 (12), pp.8443-8455. ⟨10.1021/acsabm.1c00970⟩. ⟨hal-03547189⟩

Irem Demir, Ines Lüchtefeld, Claude Lemen, Etienne Dague, Pascal Guiraud, et al.. Probing the interactions between air bubbles and (bio)interfaces at the nanoscale using FluidFM technology. Journal of Colloid and Interface Science, 2021, 604, pp.785-797. ⟨10.1016/j.jcis.2021.07.036⟩. ⟨hal-03423284⟩

Sophie Klemm, Martina Baum, Haoyi Qiu, Zibin Nan, Mafalda Cavalheiro, et al.. Development of Polythiourethane/ZnO-Based Anti-Fouling Materials and Evaluation of the Adhesion of Staphylococcus aureus and Candida glabrata Using Single-Cell Force Spectroscopy. Nanomaterials, 2021, 11 (2), pp.271. ⟨10.3390/nano11020271⟩. ⟨hal-03136104⟩

Elise Rigot. Vampyroteuthis Infernalis as Bioluminescent Lighthouse to Think among the Living.. Flusser Studies, 2021, Vilém Flusser and His “Languages”, 30. ⟨hal-03197472⟩

Lauriane Onfroy-Roy, Dimitri Hamel, Laurent Malaquin, Audrey Ferrand. Colon Fibroblasts and Inflammation: Sparring Partners in Colorectal Cancer Initiation?. Cancers, 2021, 13 (8), ⟨10.3390/cancers13081749⟩. ⟨hal-03206676⟩

Elise Rigot. Vampyroteuthis Infernalis, le podcast comme format de recherche-création. Flusser Studies, 2021, Flusser et la France, 31. ⟨hal-03335819⟩

Childérick Séverac, Sergio Proa-Coronado, Adrian Martinez-Rivas, Cécile Formosa-Dague, Etienne Dague. Automation of Bio-Atomic Force Microscope Measurements on Hundreds of C. albicans Cells. Journal of visualized experiments : JoVE, 2021, 170, ⟨10.3791/61315⟩. ⟨hal-03025337⟩

Clara Bouyx, Marion Schiavone, Marie-Ange Teste, Etienne Dague, Nathalie Sieczkowski, et al.. The dual role of amyloid-β-sheet sequences in the cell surface properties of FLO11-encoded flocculins in Saccharomyces cerevisiae. eLife, 2021, 10, pp.e68592. ⟨10.7554/eLife.68592⟩. ⟨hal-03434693⟩

Juan Carlos C Camacho-Fernández, Génesis Karendash González Quijano, Childerick Severac, Etienne Dague, Véronique Gigoux, et al.. Nanobiomechanical behavior of Fe3O4@SiO2 and Fe3O4@SiO2-NH2 nanoparticles over HeLa cells interfaces. Nanotechnology, 2021, 32 (38), pp.385702. ⟨10.1088/1361-6528/ac0a13⟩. ⟨hal-03260468⟩

Justine Creff, Laurent Malaquin, Arnaud Besson. In vitro models of intestinal epithelium: towards bioengineered systems. Hospitals, 2021, 12, ⟨10.1177/2041731420985202⟩. ⟨hal-03366154⟩

Laurent Malaquin, Morgan Delarue, Anne Marie Gué. Les « systèmes micro-physiologique » : des outils pour modéliser le vivant. Le petit illustré, regards croisés de chercheur.es, 2021. ⟨hal-03459155⟩

Jeleel Opeyemi Agboola, Marion Schiavone, Margareth Øverland, Byron Morales-Lange, Leidy Lagos, et al.. Impact of down-stream processing on functional properties of yeasts and the implications on gut health of Atlantic salmon (Salmo salar). Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-83764-2⟩. ⟨hal-03261870⟩

Communications dans un congrès

Ibrahima Drame, Jean-Christophe Piard, Marie-Pierre Chapot-Chartier, Christine Lafforgue, Etienne Dague, et al.. Pili drive homotypic interactions to form biofilm in Lactococcus lactis : A single-molecule force spectroscopy study. 7ème journée thématique du GDR B2i, Vincent Humblot, Sep 2021, Toulouse, France. ⟨hal-04783455⟩

Irem Demir, Jonas Blockx, Etienne Dague, Pascal Guiraud, Koenraad Muylaert, et al.. Understanding chitosan-induced flocculation mechanism in C. vulgaris using atomic force microscopy (AFM). International confenrence on Biomass, Bioproducts and Biofuels (AlgalBBB 2021), Jun 2021, Virtuel, United Kingdom. ⟨hal-03430080⟩

Irem Demir, Ines Lüchtefeld, Claude Lemen, Etienne Dague, Pascal Guiraud, et al.. Probing the interactions between air bubbles and (bio)-interfaces at the molecular scale using FluidFM technology. Colloque de la Société française des Microscopies (Sfµ), Jul 2021, Reims (Virtuel), France. ⟨hal-03430090⟩

Etienne Dague. Biomedical Applications of Atomic Force Microscopy. MSC-SMC-2021, microscopical society of Canada, Jun 2021, Hamilton (online), Canada. ⟨hal-03260476⟩

Etienne Dague, Sergio Proa Coronado, Childérick Séverac, Adrian Martinez Rivas. Beyond the paradigm of nanomechanical measurements on cells using AFM: an automated methodology to rapidly analyse thousands of cells. C'Nano The Nanoscience meeting, Nov 2021, Toulouse, France. ⟨hal-03470311⟩

Elise Rigot. Vampyroteuthis as a bioluminescent lighthouse to think under the livings.. Vilém Flusser and His “Languages”, Anita Jóri, Vilém Flusser Archive, Jun 2020, Berlin, Germany. https://www.flusserstudies.net/sites/www.flusserstudies.net/files/media/attachments/rigot-vampyroteuthis-infernalis.pdf. ⟨hal-04473680⟩

Autres documents

Irem Demir, Ines Lüchtefeld, Claude Lemen, Etienne Dague, Pascal Guiraud, et al.. Probing the interactions between bubbles (gas / liquid) and (bio)interfaces at the molecular scale using FluidFM technology. Journées plénières du GDR Bioingénierie des Interfaces (B2I), Sep 2021, Toulouse, France. ⟨hal-03429997⟩

Elise Rigot, Christophe Vieu. Engineering Materials for Regenerative Medicine: A time issue. 2021. ⟨hal-03319094v2⟩

Rapports

Ophélie Thomas- -Chemin, Etienne Dague, Emmanuelle Trévisiol, Childérick Séverac. Automated measurement of mechanobiological properties of cells by atomic force microscopy (AFM). LAAS-CNRS. 2021. ⟨hal-04918727⟩

2020

Articles dans une revue

Bastien Venzac, Yang Liu, Ivan Ferrante, Pablo Vargas, Ayako Yamada, et al.. Sliding walls: a new paradigm for fluidic actuation and protocol implementation in microfluidics. Microsystems & Nanoengineering, 2020, 6 (1), ⟨10.1038/s41378-019-0125-7⟩. ⟨hal-03041894v2⟩

Mario Piedrahita-Bello, José Elias Angulo-Cervera, Rémi Courson, Gábor Molnár, Laurent Malaquin, et al.. 4D printing with spin-crossover polymer composites. Journal of Materials Chemistry C, 2020, 18 (8), pp.6001-6005. ⟨10.1039/d0tc01532f⟩. ⟨hal-02570972⟩

Anaïs Chalard, Morgane Mauduit, Sandrine Assié-Souleille, Pierre Joseph, Laurent Malaquin, et al.. 3D printing of a biocompatible low molecular weight supramolecular hydrogel by dimethylsulfoxide water solvent exchange. Additive Manufacturing, 2020, 33, pp.101162. ⟨10.1016/j.addma.2020.101162⟩. ⟨hal-02540295⟩

Elise Rigot, Jonathan Justin Strayer. Retour vers 1972 : rouvrir les possibles pour le design et l’économie face aux effondrements. Sciences du Design, 2020, 2020/1 (11), pp.32-41. ⟨10.3917/sdd.011.0032⟩. ⟨hal-02892484⟩

Alejandro Kayum Jimenez Zenteno, Aline Cerf. Liquid Biopsy Based on Circulating Cancer‐Associated Cells: Bridging the Gap from an Emerging Concept to a Mainstream Tool in Precision Medicine. Advanced Biosystems, 2020, 4 (2), pp.1900164. ⟨10.1002/adbi.201900164⟩. ⟨hal-03098405⟩

Pierre-Louis Taberna, Reasmey Phary Tan, Cherif Rouabhi, Christophe Capello, Julien Schauber, et al.. Practical Works on Nanotechnology: Middle School to Undergraduate Students. IEEE Nanotechnology Magazine, 2020, 14 (4), pp.21-28. ⟨10.1109/mnano.2020.2994822⟩. ⟨hal-03411537⟩

Ibrahima Dramé, Cécile Formosa-Dague, Marie-Pierre Chapot-Chartier, Jean-Christophe Piard, Mickaël Castelain, et al.. Analysis of Homotypic Interactions of Lactococcus lactis Pili Using Single-Cell Force Spectroscopy. ACS Applied Materials & Interfaces, 2020, 12 (19), pp.21411-21423. ⟨10.1021/acsami.0c03069⟩. ⟨hal-02860018⟩

Petra Jusková, Lionel Matthys, Jean-Louis Viovy, Laurent Malaquin. 3D deterministic lateral displacement (3D-DLD) cartridge system for high throughput particle sorting. Chemical Communications, 2020, 56 (38), pp.5190-5193. ⟨10.1039/C9CC05858C⟩. ⟨hal-02547068⟩

Lauriane Onfroy-Roy, Dimitri Hamel, Julie Foncy, Laurent Malaquin, Audrey Ferrand. Extracellular Matrix Mechanical Properties and Regulation of the Intestinal Stem Cells: When Mechanics Control Fate. Cells, 2020, 9 (12), ⟨10.3390/cells9122629⟩. ⟨hal-03128878⟩

Onesto Valentina, Angelo Accardo, Christophe Vieu, Gentile Francisco. Small-world networks of neuroblastoma cells cultured in three-dimensional polymeric scaffolds featuring multi-scale roughness. Neural Regeneration Research, 2020, 15 (4), pp.759. ⟨10.4103/1673-5374.266923⟩. ⟨hal-04887857⟩

S. Proa-Coronado, Childérick Séverac, A. Martinez-Rivas, Etienne Dague. Beyond the paradigm of nanomechanical measurements on cells using AFM: an automated methodology to rapidly analyse thousands of cells. Nanoscale Horizons, 2020, 5 (1), pp.131-138. ⟨10.1039/C9NH00438F⟩. ⟨hal-03025101⟩

Irem Demir, Jonas Blockx, Etienne Dague, Pascal Guiraud, Wim Thielemans, et al.. Nanoscale Evidence Unravels Microalgae Flocculation Mechanism Induced by Chitosan. ACS Applied Bio Materials, 2020, 3 (12), pp.8446-8459. ⟨10.1021/acsabm.0c00772⟩. ⟨hal-03025212⟩

Communications dans un congrès

Irem Demir, Ines Lüchtefeld, Claude Lemen, Pascal Guiraud, Etienne Dague, et al.. Fluidic force microscopy to access the interactions between gaz/liquid and biological interfaces. Microbe-on-chip, Oct 2020, Toulouse (on line), France. ⟨hal-03428273⟩

Lac Claire, Julie Foncy, Laurent Malaquin, Corinne Bousquet, Morgan Delarue, et al.. Impact de la mécanique sur le stroma dans le cas du cancer du pancréas. Workshop "Matrice extracellulaire & Cancer", Sep 2020, Toulouse, France. ⟨hal-04834102⟩

Pré-publications, documents de travail

Lucie Albert, Emmanuelle Trévisiol, Christophe Vieu. Surface bio-pattern characterization - Nanoscale analysis of surface bio-patterning using SEEC technology. 2020. ⟨hal-02392798⟩

Texte à modifier dans l’interface d’édition: champ 'productions' de la page Equipe.

Thèses / HDR soutenues

2023

Mélanie Escudero, Thèse: Ingénierie de micro-environnements 3D pour la génération de tissus adipeux beiges humains fonctionnels et pré-vascularisés: du modèle organoïde ex vivo au micro-tissu transplantable

Victor Fournié, Thèse: Développement d’une bio-imprimante 3D opto-fluidique pour l’impression haute résolution et multimatériaux d’hydrogel

2022

Elise Rigot, Thèse: Design & savoirs sensibles : une recherche-création sur les technologies 3D et l'ingénierie du vivant au sein de l'anthropocène

2021

Roberto Riesco Alvarez, Thèse: Étude de microenvironments cellulaires 3D pour le développement des modèles in-vitro de la moelle osseuse

Dramé Ibrahima, Thèse: Etude du rôle des pili de Lactococcus lactis dans la structuration d'un biofilm : approche biophysique multi-échelle

2020

Emmanuelle Trévisiol, Habilitation à diriger des recherches: Bioconjugaison et biofonctionnalisation - Etudes à l'interface entre les micro et nanotechnologies

Emma Raude, Thèse: Développement, validation et caractérisation d’un modèle ex vivo de peau humaine perfusé : FlowSkin

Sergio Proa Coronado, Thèse: Automatisation des mesures AFM pour des applications en biologie

2019

Justine Creff, Thèse: Etude des mécanismes impliqués dans le contrôle du destin des cellules souches intestinales et développement d'un modèle 3D d'épithélium intestinal

Marion Portes, Thèse: Nouvelles approches pour l'étude de l'architecture et la dynamique de la sealing zone des ostéoclastes

2018

Emma Desvignes, Thèse: Dispositifs fluidiques 3D pour l'étude de la migration cellulaire des macrophages

Alejandro Kayum Jimenez Zenteno, Thèse: Micro-dispositifs pour l'isolement des cellules tumorales circulantes en routine clinique

Laurent Malaquin, Habilitation à diriger des recherches: Microenvironnements pour l’analyse biologique et l’ingéniérie des tissus

2017

Maxime Sahun, Thèse: Développement d’un capteur à base de polymère à empreintes moléculaires pour la quantification de la sphingosine 1-phosphate libre et circulante comme biomarqueur du mélanome cutané

2016

Hélène Cayron, Thèse: Sélection et capture de biomarqueurs moléculaires et cellulaires à partir d'un fluide complexe

Véronique Lachaize, Thèse: Propriétés biophysiques des cardiomyocytes vivants en condition physio/physiopathologique et architecture des récepteurs couplés aux protéines G explorées par microscopie à force atomique

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